Galaxea fascicularis — Single-cell Explorer

Interactive cell atlas, gene expression, Dot Plot, and Violin Plot.

—Cells
—Genes
—Assay / layer
—Displayed groups

Select up to 12 genes for Dot Plot. Click a selected gene to update expression UMAP and Violin.

Main cell types and detailed clusters are read directly from the Seurat metadata.

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Cell atlas

UMAP colored by the selected annotation.

Gene expression UMAP

Per-cell log-normalized expression.

Choose a gene to display expression.

Dot Plot

Dot size: percent expressing; color: scaled average expression.

Add one or more genes to create a Dot Plot.

Violin Plot

Expression distribution across all cells in each group, including zero values.

Choose a gene to create a Violin Plot.